Faculty

Assoc.Prof.Dr. Jonathan Hoyin Chan
รศ.ดร. โจนาธาน โฮยิน ชาน

Present Position :

  • Associate Dean for International Relations.

School of Information Technology,
King Mongkut's University of Technology Thonburi.

Email : jonathan@sit.kmutt.ac.th
Tel : 0-2470-9819


Academic Background

 
  • Ph.D. (Chemical Engineering)
    1995, University of Toronto, Ontario, Canada
  • M.A.Sc. (Chemical Engineering)
    1986, University of Toronto, Ontario, Canada
  • B.A.Sc. (Engineering Science)
    1984, University of Toronto, Ontario, Canada

  • Title of Ph.D. Thesis
     
  • 1985, The Thermal Degradation of Polypropylene and the Effect of Infrared-Laser Irradiation

  • Teaching Experience
     
  • Applied Process Industry
  • Applied Simulation Modeling
  • Computer Applications in Food Engineering
  • Data Communications
  • Data Mining
  • Decision Support Systems
  • Discrete Mathematics
  • Foundations of Computer Science
  • Introduction to Bioinformatics
  • Introduction to Computer Programming
  • Machine Learning
  • Management Information Systems
  • Mathematical Analysis for Chemical Engineering
  • Plant Design
  • Process Control & Instrumentation
  • Python Programming and Applications
  • Selected Programming Language
  • Sequence Analysis and Annotation
  • Social Media
  • Software Engineering
  • Statistics for Scientists
  • Syntax and Semantics of Programming Languages

  • Professional Experience

    2013 - PresentAssociate Professor, School of Information Technology, KMUTT
    2010 - PresentAssociate Dean for International Relations, School of Information Technology, KMUTT
    2010 - 2014Chairperson of B.Sc. Program in Computer Science, School of Information Technology, KMUTT
    2009 - 2013Assistant Professor, School of Information Technology, KMUTT
    2005 - 2009Lecturer, School of Information Technology, KMUTT
    2001 - 2005Lecturer, Chemical Engineering Practice School, KMUTT
    1999 - 2001Deputy Director, Industrial Park Center, KMUTT
    1995 - 2000President, JHC Technology Group, Canada
    1996 - 1998Vice President, Technology, CRF Technologies Group Ltd, Canada
    1995 - 1996Development Specialist, SRP Industries Ltd./SRP Nuwood Inc., Canada
    1985 - 1995Research Assistant, Department of Chemical Engineering and Applied Chemistry, University of Toronto, Canada
    2007Visiting Professor, University of Toronto, Canada
    1999Vice President, Technology, Imperial PlasTech Inc., Canada
    1995Foreign Expert, Faculty of Industrial Technology, Silpakorn University


    Research Interests
     
  • Parallel and Grid Computing
  • Knowledge Engineering and Social Computing
  • Signal Processing and Analysis
  • Bioinformatics
  • Mathematical Modeling and Simulation

  • Others

    • Member of Professional Engineers of Ontario (PEO)
    • Senior Member of Institute of Electrical and Electronics Engineers (IEEE) - Computational Intelligence Society (CIS), Engineering in Medicine and Biology Society (EMB), Communications Society (COMSOC)
    • Member, IEEE CIS Emergent Technologies Technical Committee (ETTC), 2011-2014 
    • Member of Association for Computing Machinery (ACM)
    • Member of International Neural Network Society (INNS)
    • Secretary, INNS, 2011-2012
    • Member, Governing Board, Asia Pacific Neural Network Assembly (APNNA)
    • Collaborator, Systems Biology and Bioinformatics (SBI) group, KMUTT.
    • Member, Editorial Board, Neural Networks (Elsevier), 2013-2015
    • General Co-Chair, 3rd INNS Winter Conference (INNS-WC2012), Bangkok, Thailand, October 3-5, 2012
    • General Co-Chair, 1st International Conference on Computational Systems-Biology and Bioinformatics (CSBio2010), Bangkok, Thailand, November 4-5, 2010
    • President, APNNA, 2009
    • General Chair, 16th International Conference on Neural Information Processing (ICONIP’09), Bangkok, Thailand, December 1-5, 2009


    Publication
     
  • Pitak Sootanan, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2012, Pathway-based microarray analysis for robust disease classification, Neural Comput & Applic 2012, , 21(4), PP. 649-660, DOI No: 10.1007/s00521-011-0662-y.
  • Jonathan H. Chan, Tasanee Limsuwan,2012, Web-Based Decision Support System for School Meal Planning, International Journal of Information Systems and Social Change 2012, , 3(1), PP. 10-21, DOI: 10.4018/jissc.2012010102.
  • Fei Zhu, Preecha Patumcharoenpol, Chen Zhang, Yang Yang, Jonathan Hoyin Chan, Asawin Meechai, Wanwipa Vongsangnak, Bairong Shen,2012, Biomedical text-mining and its applications in cancer research, J Biomed Inform 2012, http://dx.doi.org/10.1016/j.jbi.2012.10.007,
  • Shoba Ranganathan, Christian Schönbach, Sissades Tongsima, Jonathan Chan and Tin Wee Tan (Eds.),2012, BMC Bioinformatics 2012, 13(Suppl 17): Bioinformatics, Eleventh International Conference on Bioinformatics, InCoB 2012, 3-5 October, Bangkok, Thailand, Proceedings, BMC 2012. (http://www.biomedcentral.com/bmcbioinformatics/supplements/13/S17)
  • Shoba Ranganathan, Christian Schönbach, Sissades Tongsima, Jonathan Chan and Tin Wee Tan (Eds.),2012, BMC Genomics 2012, 13(Suppl 7): Computational Biology, Eleventh International Conference on Bioinformatics, InCoB 2012, 3-5 October, Bangkok, Thailand, , Proceedings, BMC 2012. (http://www.biomedcentral.com/bmcgenomics/supplements/13/S7)
  • Jonathan H. Chan, Asawin Meechai, Chee Keong Kwoh (Eds.),2012, Procedia Computer Science (PROCS), Volume 11: Computational Systems-Biology and Bioinformatics, Third International Conference, CSBio 2012, 3-5 October, Bangkok, Thailand, Proceedings, Elsevier 2012. DOI No: 10.1016/j.procs.2012.09.001
  • Jutarat Choomkasean, Pornchai Mongkolnam, and Jonathan Hoyin Chan,2012, Multimedia Delivery for Elderly People: A Conceptual Model, Proceedings of the 5th International Conference on Advances in Information Technology, IAIT 2012, 6-7 December, CCIS 344, Bangkok, Thailand, PP. 58-69
  • Worrawat Engchuan and Jonathan H. Chan,2012, Pathway-based multi-class classification of lung cancer, Proceedings of the 19th International Conference on Neural Information Processing, ICONIP 2012, 12-15 November ,LNCS 7667 (Part V), Doha, Qatar, PP. 697-702
  • Worrawat Engchuan and Jonathan Hoyin Chan,2012, Classification of real and pseudo pre-miRNAs in plant species, ,” Proceedings of the 3rd International Conference on Computational Systems-Biology and Bioinformatics, CSBio 2012, 3-5 October ,Procedia Computer Science 11, Bangkok, Thailand, PP. 17-23.
  • P. Patumcharoenpol, J. Chan, A. Meechai, B. Shen, W. Vongsangnak,2012, Bibliome mining platform and application for building metabolic interaction network, Proceedings of the 3rd International Conference on Computational Systems-Biology and Bioinformatics, CSBio 2012, 3-5 October, Procedia Computer Science 11, Bangkok, Thailand, PP. 44-51
  • Santitham Prom-on, Atthawut Chanthaphan, Jonathan Hoyin Chan, Asawin Meechai,2011, Enhancing biological relevance of a weighted gene co-expression network for functional module identification, Journal of Bioinformatics and Computational Biology 2011, , 9(1), PP. 111-129, DOI No: 10.1142/S0219720011005252
  • Pitak Sootanan, Asawin Meechai, Santitham Prom-on, Jonathan H. Chan,2011, Pathway-based microarray analysis with negatively correlated feature sets for disease classification, Proceedings of the 18th International Conference on Neural Information Processing: Models and Applications, ICONIP 2011, 14-17 November, LNCS 7062 (Part I), Shanghai, China, PP. 676-683
  • P. Patumcharoenpol, J. Chan, S. Prom-on, A. Meechai,2011, Strategies for Pathway-based analysis of genome-wide SNP data , Proceedings of ICBPE-2011/CSBio-2011 in Symposium on Biomedical-Pharmaceutical Engineering & Industrial Biotechnology at the Defense, Science & Research (DSR-2011) Conference , August 3 – 5, 2011, Singapore
  • Jonathan H. Chan, Pitak Sootanan, Ponlavit Larpeampaisarl,2011, Feature selection of pathway markers for microarray-based disease classification using negatively correlated feature sets , Proceedings of the International Joint Conference on Neural Networks , July 31 – August 5, 2011, San Jose, California, USA , PP. 3293-3299
  • Stephanus Daniel Handoko, Chee Keong Kwoh, Yew Soon Ong and Jonathan Chan ,2011, Classification-assisted memetic algorithms for solving optimization problems with restricted equality constraint function mapping , Proceedings of the 2011 IEEE Congress on Evolutionary Computation, CEC 2011 , June 5-8, 2011, New Orleans, USA, PP. 1209-1216, DOI No: 10.1109/CEC.2011.5949754
  • Pich Tantichukaitikul, Sattara Hattirat, and Jonathan H. Chan,2010, Parallel Pairwise Sequence Alignment Algorithm Based on Longest Common Subsequence, Journal of Information Science and Technology 2010, July - December, 1(2), PP. 1-10, ISSN:1906-9553.
  • Jonathan H. Chan, Yew-Soon Ong, Sung-Bae Cho (Eds.),2010, Communications in Computer and Information Science (CCIS), Volume 115: Computational Systems-Biology and Bioinformatics, First International Conference, CSBio 2010, 3-5 November, Bangkok, Thailand ,Proceedings, Springer 2010, ISBN 978-3-642-16749-2, DOI No: 10.1007/978-3-642-16750-8
  • Pitak Sootanan, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2010, Microarray-based disease classification using pathway activities with negatively correlated feature sets, Proceedings of the 17th International Conference on Neural Information Processing: Models and Applications, ICONIP 2010, 22-25 November,LNCS 6444 (Part 2), Sydney, Australia, PP. 250-258, DOI No: 10.1007/978-3-642-17534-3
  • Jonathan H. Chan, Tarnwimon Siriruangampai, Phatra Thamrongthanyawong, Tasanee Limsuwan,2010, Web-based meal planning system for elementary school students, Proceedings of the 2nd International Conference on IT and Business Intelligence (ITBI-10), 12-14 November , Nagpur, India, PP. 115.1-115.10
  • Sattara Hattirat, Chumpol Ngamphiw, Anunchai Assawamakin, Jonathan Chan, and Sissades Tongsima,2010, Catalog of genetic variations (SNPs and CNVs) and analysis tools for Thai genetic studies, Proceedings of the First International Conference on Computational Systems-Biology and Bioinformatics, CSBio 2010, 3-5 November ,CCIS 115, Bangkok, Thailand, PP. 130-140,DOI No: 10.1007/978-3-642-16750-8
  • Pich Tantichukaitikul, Sattara Hattirat, Jonathan H. Chan,2010, Parallel LCS algorithm for pairwise sequence alignment, Proceedings of the 3rd National Conference on Information Technology, NCIT 2010, 28-29 October, Bangkok, Thailand, PP. 192-195. (Best Paper Award)
  • M. Supattatham, N. Waraporn, W. Thumbanthu, J.H. Chan,2010, Design of a contactless sensor system for woven-bag manufacture monitoring, Proceedings of the 2nd Asia Symposium on Quality Electronic Design, ASQED 2010 , 3-4 August, Penang, Malaysia, PP. 93-97,art. no. 5548220
  • W. Engchuan, S. Prom-on, J. H. Chan, and A. Meechai,2010, The estimation of SNP-SNP interaction in pooled DNA, Proceedings of the 14th International Annual Symposium on Computational Science and Engineering, ANSCSE 14, 23-26 March, Chiang Rai, Thailand, PP. 65-70
  • P. Treepong, S. Prom-on, J. H. Chan, A. Meechai, and N. Hirankarn, ,2010, Effect of RNA Quality on Gene Expression Functional Profiles, Proceedings of the 14th International Annual Symposium on Computational Science and Engineering, ANSCSE 14, 23-26 March, Chiang Rai, Thailand, PP. 71-76
  • Jonathan H. Chan and Asawin Meechai,2009, Editorial – Computational Advances in Bioinformatics, ,” Australian Journal of Intelligent Information Processing Systems 2009, , 10(4), PP. 1-3, ISSN 1321-2133.
  • Jonathan H. Chan and Asawin Meechai (Eds.),2009, Australian Journal of Intelligent Information Processing Systems, Volume 10, No. 4: Computational Advances in Bioinformatics, , ISSN 1321-2133
  • Chi-Sing Leung, Minho Lee, Jonathan H. Chan (Eds.),2009, .), Lecture Notes in Computer Science (LNCS), ), Volume 5863: Neural Information Processing, 16th International Conference, ICONIP 2009, 1-5 December ,Proceedings, Part I, Springer 2009, Bangkok, Thailand ,ISBN 978-3-642-10676-7.
  • Chi-Sing Leung, Minho Lee, Jonathan H. Chan (Eds.),2009, Lecture Notes in Computer Science (LNCS), Volume 5864: Neural Information Processing, 16th International Conference, ICONIP 2009, 1-5 December ,Proceedings, Part II, Springer 2009, Bangkok, Thailand ,ISBN 978-3-642-10682-8
  • Atthawut Chanthaphan, Santitham Prom-on, Asawin Meechai, Jonathan Chan,2009, Identifying Functional Modules using MST-based Weighted Gene Co-Expression Networks, Proceedings of the 9th IEEE International Conference on Bioinformatics and Bioengineering (BIBE2009), 22-24 June, Taichung, Taiwan, PP. 192-199,art. no. 5211291
  • Thammakorn Saethang, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, Embedded Sample Filtering Algorithm for Feature Selection, Proceedings of the Commemorative International Conference of KMUTT, SDSE 2008, 7-9 April, Bangkok, Thailand, PP. 503-506
  • Atthawut Chanthaphan, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, Inferring Significant Functional Modules of Autism Spectrum Disorder by Pathway Based Gene Co-Expression Analysis, Proceedings of the Commemorative International Conference of KMUTT, SDSE 2008, 7-9 April, Bangkok, Thailand, PP. 507-511
  • Patcharporn Sereejaitham, Santitham Prom-on, Jonathan Chan, Boonsong Ongphiphadhanakul, and Asawin Meechai,2009, Multilevel quality control in pooled-DNA genome wide association study of osteoporosis, Proceedings of the 13th International Annual Symposium on Computational Science and Engineering, ANSCSE 13, 25-27 March, Bangkok, Thailand, PP. 421-426
  • Narumol Doungpan, Santitham Prom-on, Asawin Meechai, and Jonathan Hoyin Chan, ,2009, On the integrative analysis of network-based biomarkers of autism spectrum disorder from gene expression profiles and protein-protein interaction network, Proceedings of the 13th International Annual Symposium on Computational Science and Engineering, ANSCSE 13, 25-27 March, Bangkok, Thailand, PP. 414-420
  • Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, A Wavelet-based Monte Carlo Simulation of Odds Ratio Contour in Genome-wide Association Study, Proceedings of 2008 International Symposium on Intelligent Signal Processing and Communication Systems, ISPACS 2008, 8-11 February, Bangkok, Thailand
  • Narumol Doungpan, Santitham Prom-on, Asawin Meechai, and Jonathan Hoyin Chan,2009, On the integrative analysis of network-based biomarkers of autism spectrum disorder from gene expression profiles and protein-protein interaction network, Proceedings of the 13th International Annual Symposium on Computational Science and Engineering (ANSCSE 13), 25 - 27 March 2009, Bangkok, Thailand, PP. 414-420
  • Patcharporn Sereejaitham, Santitham Prom-on, Jonathan Chan, Boonsong Ongphiphadhanakul, and Asawin Meechai,2009, Multilevel quality control in pooled-DNA genome wide association study of osteoporosis, Proceedings of the 13th International Annual Symposium on Computational Science and Engineering (ANSCSE 13), 25 - 27 March 2009, Bangkok, Thailand, PP. 421-426
  • Atthawut Chanthaphan, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, Inferring Significant Functional Modules of Autism Spectrum Disorder by Pathway Based Gene Co-Expression Analysis, Proceedings of the Commemorative International Conference of KMUTT, SDSE 2008, 7 - 9 January 2009, Bangkok, Thailand
  • Thammakorn Saethang, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, Embedded Sample Filtering Algorithm for Feature Selection, Proceedings of the Commemorative International Conference of KMUTT, SDSE 2008, 7 - 9 January 2009, Bangkok, Thailand
  • Atthawut Chanthaphan, Santitham Prom-on, Asawin Meechai, Jonathan Chan,2009, Identifying Functional Modules using MST-based Weighted Gene Co-Expression Networks, Proceedings of the 9th IEEE International Conference on Bioinformatics and Bioengineering (BIBE2009), 22 - 24 June 2009, Taichung, Taiwan, PP. 192-199
  • Pitak Sootanan, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2009, Pathway Activity Inferences with Negatively Correlated Features for Pancreatic Cancer Classification, Proceedings of the 2009 2nd International Conference on Biomedical Engineering and Informatics, BMEI 2009, 17 - 19 October, Tianjin, China
  • Tanaporn Uengwetwanit, Asawin Meechai, Wallaya Jongjaroenprasert, Boonsong Ongphiphadhanakul, Jarukit Lertbantanawong, Jonathan H. Chan,2008, An Analytical Process for Screening Susceptibility Genes of Type 2 Diabetes Mellitus Using Pooled DNA Microarray Data, Proceedings of 2008 IAENG International Conference on Bioinformatics (ICB’08) in IMECS2008, 19 - 21 March 2008, Hong, Kong, China, PP. 195-199
  • Prom-on, S.; Chan, J.; Meechai, A.; Jongjaroenprasert, W.; Ongphiphadhanakul, B.,2008, Identifying Disease Susceptible DNA Regions Using Underlying Odds Ratio Contour Analysis, International Conference on Biocomputation, Bioinformatics, and Biomedical Technologies, 2008, BIOTECHNO 2008, 29 - 5 June 2008, Bucharest, Romania, PP. 13-16
  • Thammakorn Saethang, Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2008, Sample Filtering Relief Algorithm: Robust Algorithm for Features Selection, Proceedings of the 15th International Conference on Neural Information Processing (ICONIP 2008), 25 - 28 November ,LNC 5507(Part 2 ), Auckland, New Zealand, PP. 260-267
  • Santitham Prom-on, Asawin Meechai, Jonathan H. Chan,2008, A Wavelet-based Monte Carlo Simulation of Odds Ratio Contour in Genome-wide Association Study, Proceedings of 2008 International Symposium on Intelligent Signal Processing and Communication Systems (ISPACS 2008), 8 - 11 February 2008, Bangkok, Thailand
  • Bunthit Watanapa, Jonathan H. Chan,2007, Neural Network Classification of Extended Control Chart Patterns, WSEAS Transactions on Computers, 1 - 1 January 2007, Vol. 6, PP. 160-166
  • Bunthit Watanapa and Jonathan H. Chan,2006, Classification of Extended Control Chart Patterns: A Neural Networks Approach, Proceedings of 6th WSEAS International Conference on Simulation, Modelling and Optimization (SMO ’06), 22 - 24 September 2006, Lisbon, Portugal
  • Jarukit Lertbantanawong and Jonathan H. Chan,2006, A Systematic Statistical Process for Microarray Data Analysis: Countering the Limitations in the Public Data Sets, Proceedings of 2006 IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology, CIBCB'06, 28 - 29 September 2006, CIBCB'06, Toronto, Canada, PP. 414-421, art. no.4133202
  • Saranya Sangprapai, Peter L. Douglas, and Jonathan H. Chan,2006, Modeling and Simulation of an In-Situ CO2 Capturing Process, International Conference on Modeling in Chemical and Biological Sciences (CBES2006), 26 - 27 October 2006, Bangkok, Thailand
  • Panghom Jermsutjarit, Donald W. Kirk, and Jonathan H. Chan,2006, Upgrading of Waste Biogas via Water Scrubbing, International Conference on Modeling in Chemical and Biological Sciences (CBES2006), 26 - 27 October 2006, Bangkok, Thailand
  • Tanaporn Eungwatwanit, Asawin Meechai , Jonathan Chan, Wallaya Jongjaroenprasert,2006, The effect of preprocessing on the results of pooled DNA SNP microarray analysis, The 18th Annual meeting of the Thai society for Biotechnology, 2 - 3 November 2006, Bangkok, Thailand
  • P. Jermsutjarit, J. H. Chan and D. W. Kirk,2005, Upgrading of Biogas via Water Scrubbing, 55th Canadian Chemical Engineering Conference, 16 - 19 October 2005, Toronto, Canada
  • K. Thamkoson and J. H. Chan,2005, Conversion of i-Paraffin to n-Paraffin for a Naphtha Process, 55th Canadian Chemical Engineering Conference, 16 - 19 October 2005, Toronto, Canada
  • R. A. Dunn and J. H. Chan,2005, Air Pollution Issues in Thailand, Frontiers of the Global and Urban Environment symposium, 55th Canadian Chemical Engineering Conference, 16 - 19 October 2005, Toronto, Canada
  • C. Kheanprasit, W. Lerdwijitjard and J. H. Chan,2005, Water Vapour Transmission Characteristics of Breathable Films, Proceedings of Starch Update 2005, BioThailand 2005, 4 - 5 November 2005, Bangkok, Thailand, PP. 377-382
  • C. Kheanprasit and J. H. Chan,2005, Thermal Kinetic Analysis of Maltodextrin, Proceedings of Starch Update 2005, BioThailand 2005, 4 - 5 November 2005, Bangkok, Thailand, PP. 129-134
  • T. Pattanothai, J. Pimsamarn, A. Tongta and J. H. Chan,2004, Modeling of Permeability of Polymeric Membranes, Proceedings of the 15th International Symposium on Transport Phenomena, 9 - 13 March 2004, Bangkok, Thailand, PP. 711-716
  • J. H. Chan, T. Singhaniyom and S. Therdtianwong,2004, Quantification of Degree of Mixing of PMB Blends Using Image Processing, Proceedings of the 15th International Symposium on Transport Phenomena, 9 - 13 March 2004, Bangkok, Thailand, PP. 111-116
  • J. H. Chan & S. T. Balke,1997, The thermal degradation kinetics of polypropylene: Part III. Thermogravimetric analyses, Polym. Degrad. Stab. 1997, , 57(2), PP. 135-149.
  • J. H. Chan & S. T. Balke,1997, The thermal degradation kinetics of polypropylene: Part II. Time-temperature superposition, Polym. Degrad. Stab. 1997, , 57(2), PP. 127-134.
  • J. H. Chan & S. T. Balke,1997, The thermal degradation kinetics of polypropylene: Part I. Molecular weight distribution, Polym. Degrad. Stab. 1997, 57(2), PP. 113-126.
  • Dedo Suwanda, Jonathan Chan, Vincent Zhou, and Jarek Lutoslawski,1997, Product Design and Performance Issues for Domestic and Offshore Markets, Proceedings of the Fourth International Conference on Woodfiber-Plastic Composites, 12-14 May, Madison, Wisconsin, PP. 123
  • H. Y. Chan, T. Nguyen, L. Jeng, and S. T. Balke,1987, Laser Processing of Polymers, Proceedings of the Canadian Chemical Engineering Graduate Student Conference, October, Kingston, Ontario, PP. 360
  • H. Y. Chan and R. T. Woodhams,1986, , “Impact Toughening of Filled Polypropylene Composites,” Compounding Modifiers and Additives, Theory and Practice, PMAD Regional Technical Conference, Society of Plastics Engineers, November, Akron, Ohio, PP. 59
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